CDS

Accession Number TCMCG057C10414
gbkey CDS
Protein Id XP_018469682.1
Location complement(join(43208773..43208921,43209016..43209126,43209196..43209307,43209394..43209471,43209549..43209614,43209688..43209792,43209867..43210064,43210151..43210243,43210316..43210408,43210514..43210638,43210713..43210789,43210894..43211102,43211201..43211251,43211334..43211420))
Gene LOC108841422
GeneID 108841422
Organism Raphanus sativus

Protein

Length 517aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018614180.1
Definition PREDICTED: serine hydroxymethyltransferase 1, mitochondrial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description Belongs to the SHMT family
KEGG_TC -
KEGG_Module M00140        [VIEW IN KEGG]
M00141        [VIEW IN KEGG]
M00346        [VIEW IN KEGG]
M00532        [VIEW IN KEGG]
KEGG_Reaction R00945        [VIEW IN KEGG]
R09099        [VIEW IN KEGG]
KEGG_rclass RC00022        [VIEW IN KEGG]
RC00112        [VIEW IN KEGG]
RC01583        [VIEW IN KEGG]
RC02958        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00600        [VIEW IN KEGG]
EC 2.1.2.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00260        [VIEW IN KEGG]
ko00460        [VIEW IN KEGG]
ko00630        [VIEW IN KEGG]
ko00670        [VIEW IN KEGG]
ko00680        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
ko01523        [VIEW IN KEGG]
map00260        [VIEW IN KEGG]
map00460        [VIEW IN KEGG]
map00630        [VIEW IN KEGG]
map00670        [VIEW IN KEGG]
map00680        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
map01523        [VIEW IN KEGG]
GOs GO:0001505        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004372        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006544        [VIEW IN EMBL-EBI]
GO:0006563        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0008219        [VIEW IN EMBL-EBI]
GO:0008266        [VIEW IN EMBL-EBI]
GO:0009069        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009534        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009579        [VIEW IN EMBL-EBI]
GO:0009626        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009853        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010319        [VIEW IN EMBL-EBI]
GO:0012501        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0016742        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0022626        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031976        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034050        [VIEW IN EMBL-EBI]
GO:0042133        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043094        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044445        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0048046        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGATGGCAATGGCTCTTAGGAGACTTTCTTCTTCAGTTGACAAACCTATTCGTCCTCTTATCAGATCATCCTCGTGCTACATGTCTTCTTTGCCCAGTGAAGCTGTCGATGACAAGGAGAGATCTCGTGTCACTTGGCCAAAACAGCTGAACGCATCTTTGGAGGAAGTTGATCCTGAGATTGCTGACATCATTGAGCATGAGAAAGCTAGACAATGGAAGGGGCTTGAACTCATTCCATCTGAGAATTTCACATCTGTCTCGGTGATGCAAGCTGTTGGGTCTGTGATGACTAACAAGTACAGTGAAGGCTACCCTGGTGCTAGATACTACGGAGGAAATGAGTACATAGACATGGCGGAAACCTTGTGCCAGAAGCGTGCTCTAGAAGCTTTCCGGTTAGACCCTGAGAAGTGGGGAGTGAATGTGCAACCTTTGTCTGGATCTCCTGCCAACTTCCATGTGTACACTGCATTGTTGAAGCCTCATGAGAGAATCATGGCACTTGATCTTCCTCACGGTGGTCATCTTTCTCATGGTTATCAGACTGACACCAAGAAGATATCTGCTGTGTCTATCTTCTTTGAAACAATGCCCTACCGCTTGGACGAGAGCACTGGCTTCATCGACTACGACCAGATGGAGAAAAGTGCTACTCTTTTCAGGCCAAAACTGATTGTTGCTGGTGCAAGTGCTTATGCTAGACTGTATGACTATGCCCGCATCCGAAAGGTGTGTAACAAGCAAAAAGCTGTGATGCTAGCAGATATGGCACACATAAGCGGTTTGGTTGCAGCTGGTGTGATTCCTTCACCGTTCGAGTATGCAGATGTTGTAACCACCACAACTCACAAGTCACTTCGTGGACCTCGTGGAGCCATGATTTTCTACAGAAAGGGTGTTAAGGAAATTAACAAACAAGGGAAAGAGGTTTTGTATGATTATGAAGACAAGATCAATCAAGCTGTCTTCCCTGGTCTTCAAGGTGGTCCACACAACCACACTATTACAGGACTAGCTGTTGCTTTAAAACAGGCAACTACTTCAGAGTACAAAGCATACCAAGAGCAAGTCCTGAGTAACTCTGCAAAGTTTGCTCAGACTCTGATGGAGAGAGGTTATGAACTTGTTTCTGGTGGAACTGACAACCATCTGGTTCTAGTGAACCTTAAGCCCAAGGGAATTGATGGATCTAGAGTTGAGAAAGTGTTGGAAGCTGTTCACATTGCATCCAACAAAAACACTGTCCCTGGAGATGTTTCTGCCATGGTTCCCGGTGGAATCAGAATGGGTACACCTGCTCTCACTTCCAGAGGTTTTGTTGAGGAAGACTTTGCCAAAGTAGCTGAGTACTTTGACAAAGCTGTGAAGTTGGCTCTCAAAGTCAAATCTGAAGCTCAAGGAACGAAGCTGAAAGATTTTGTGTCAGCAATGGAATCGTCTTCAGGCATCCAATCAGAGATAGCCAAGCTGCGCCACGACGTGGAGGAGTTCGCTAAGCAGTTCCCAACTATTGGGTTTGAGAAAGAAACCATGAAATACAAGATCTGA
Protein:  
MAMAMALRRLSSSVDKPIRPLIRSSSCYMSSLPSEAVDDKERSRVTWPKQLNASLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGFIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVKLALKVKSEAQGTKLKDFVSAMESSSGIQSEIAKLRHDVEEFAKQFPTIGFEKETMKYKI